Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATACTGCAGGTGCAT
.((((.((((((((((.....&))).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020150
GeneSymbolSAR1A
Binding site1610,1627
Score0.846
Seed0
Au0.544
Energy-20.1
Binding len17
Me-5.694
Phylopstem-0.09149650909090906
Phylopflank0.2518195080000001
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure