Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGAAGAGCAAGGGCT
..((...(((..(((((((((&)))))))))....)))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020157
GeneSymbolOTOR
Binding site542,564
Score0.846
Seed0
Au0.559
Energy-16.2
Binding len22
Me-18.692
Phylopstem-0.7023196666666666
Phylopflank-0.21686409125
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure