Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGCTGCATTGCTGCCAGT
..((((((..((((((((..((&))..)))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020162
GeneSymbolDHX33
Binding site5170,5190
Score0.923
Seed1
Au0.529
Energy-19.4
Binding len20
Me-7.256
Phylopstem2.682859875
Phylopflank2.2960981725
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure