Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAGAACATTGGCTTATGCCAGA
..((((((((((((((......&.))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020162
GeneSymbolDHX33
Binding site3249,3272
Score0.846
Seed1
Au0.515
Energy-18.0
Binding len19
Me-4.957
Phylopstem-0.25152767647058827
Phylopflank0.41648073125000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure