Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATACGTGGGCTCTCGGCTGGGTGTGGCCCAGCTGCGGCTGCAC
.((((((((((((((...(((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020163
GeneSymbolSEMA3G
Binding site1590,1636
Score0.846
Seed1
Au0.338
Energy-27.3
Binding len19
Me-4.026
Phylopstem-0.24596548285714287
Phylopflank-0.38080688925000006
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure