Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCTGCTGGATGCACTTTAGATGGCCTAGTATGCCAGGC
.((((((((((...((......&.))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020165
GeneSymbolRAD18
Binding site4160,4200
Score0.846
Seed1
Au0.485
Energy-19.0
Binding len17
Me-9.286
Phylopstem0.21513180000000004
Phylopflank0.069217905
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure