Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTAGAATTGCAGCA
.....(((((((((.((((.(&).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020166
GeneSymbolMCCC1
Binding site1131,1148
Score0.846
Seed0
Au0.5
Energy-18.5
Binding len17
Me-14.401
Phylopstem4.649056422222222
Phylopflank3.97586592875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure