Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATGTAGCCATAGCTGTAAC
(((((((((.(((((((..((&))..))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020166
GeneSymbolMCCC1
Binding site1734,1756
Score0.923
Seed1
Au0.632
Energy-18.3
Binding len22
Me-5.18
Phylopstem4.381482888888889
Phylopflank4.559765242500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure