Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTCCAGGTCTTTGTATGCCACTGAGGTG
(((((((((((((...((((((&.))))))))))))))))....))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020168
GeneSymbolPAK6
Binding site2148,2179
Score0.949
Seed1
Au0.5
Energy-18.6
Binding len25
Me-5.763
Phylopstem4.898592235294117
Phylopflank5.8432567325
Longest consecutive pairings16
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure