Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACCTCAGCTGCAAC
(((((((((.(((....((((&))))..))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020168
GeneSymbolPAK6
Binding site857,877
Score0.846
Seed1
Au0.338
Energy-23.0
Binding len20
Me-7.005
Phylopstem0.266151
Phylopflank3.109551327500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure