Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTATTGATGTGTATGCCAA
...(((((((((..((((((..&)))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020169
GeneSymbolLXN
Binding site870,891
Score0.846
Seed0
Au0.588
Energy-18.3
Binding len21
Me-8.661
Phylopstem2.204412677777778
Phylopflank1.2867627900000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure