Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCGACTTTTCCGCCTCGGCAACCGGACCCAGCAGCAAGCAGG
((((.(((((((((((.((((&.))))..)))))))....)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020169
GeneSymbolLXN
Binding site52,99
Score0.923
Seed0
Au0.338
Energy-24.2
Binding len28
Me-8.057
Phylopstem0.3166804266666667
Phylopflank0.2419863825
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure