Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGGGCACTTGTGCTGAGACTCTGGGACCCAGGCAGCTGCC
..((((((((((((.((.(((&.))).)).))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020170
GeneSymbolNCLN
Binding site3422,3467
Score0.962
Seed1
Au0.412
Energy-22.9
Binding len24
Me-5.692
Phylopstem-0.48440455999999993
Phylopflank-0.9153253487499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure