Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTTCGTGCTCACGGGCTACAAGTTCCAGCCCACAGGAAACAACCCGTACCTGCAGCTGCC
..((((((((((..(((.(((&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020171
GeneSymbolGPR108
Binding site1651,1716
Score1.0
Seed1
Au0.397
Energy-21.8
Binding len20
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure