Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACGAAGGTGGCAGCTGACAGA
((((((((((.((((((((((&)))))))))...).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020182
GeneSymbolPMEPA1
Binding site3207,3233
Score1.0
Seed1
Au0.441
Energy-22.7
Binding len26
Me-6.762
Phylopstem3.172893076923077
Phylopflank3.1472091124999997
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure