Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGACCGCGGTCTCGGAGCGAA
(((((((((((((((..((((&)))).))))))))).))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020182
GeneSymbolPMEPA1
Binding site16,42
Score0.846
Seed1
Au0.382
Energy-21.8
Binding len26
Me-4.171
Phylopstem3.6035449699999993
Phylopflank2.4774086102272728
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position5UTR
2D Structure