Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCGAGTCCGGGCATTGTACAAGCGCGTCTTGCAGCTGCAC
.((((((((((.(((((....&.))))).).......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020186
GeneSymbolSDHAF3
Binding site44,86
Score0.846
Seed1
Au0.382
Energy-20.4
Binding len25
Me-7.14
Phylopstem2.1418567058823528
Phylopflank1.1980008
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure