Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACCCAGCTGGGAA
((.((((((.(((...(((((&)))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020187
GeneSymbolHMCES
Binding site1411,1429
Score1.0
Seed0
Au0.471
Energy-19.8
Binding len18
Me-8.563
Phylopstem0.3837293333333332
Phylopflank-0.18301493625
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure