Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGCATTGTGCTGGGTG
(((((((..((((((((((...&)))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020188
GeneSymbolCMC2
Binding site3598,3617
Score0.846
Seed1
Au0.544
Energy-18.3
Binding len19
Me-7.308
Phylopstem0.2775890181818182
Phylopflank-0.016582785000000017
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure