Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGACAATCTGGAAGTCAGCAGCTTCCAGCTGCAGT
(((((((((.((((((.....&.))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020188
GeneSymbolCMC2
Binding site1422,1462
Score1.0
Seed1
Au0.456
Energy-22.3
Binding len19
Me-5.18
Phylopstem-0.04119511111111111
Phylopflank0.3024359257499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure