Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCATCCATTGGTCGGATGGCTGCAACCCCTGGAGCTGCAAC
((((((((.((((((((....&.)))))))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020193
GeneSymbolEMSY
Binding site1696,1739
Score0.885
Seed1
Au0.485
Energy-22.7
Binding len22
Me-4.994
Phylopstem4.174589
Phylopflank5.16037084875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure