Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAACAGACTCAGCTGCAAG
(((((((((.(..(((..(((&)))...)))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020193
GeneSymbolEMSY
Binding site3023,3046
Score0.846
Seed1
Au0.485
Energy-19.9
Binding len23
Me-9.816
Phylopstem4.571738888888889
Phylopflank3.36514312
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure