Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTAACCCAGCTGCT
..(((((((.(((((...(((&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020195
GeneSymbolSDR39U1
Binding site49,66
Score1.0
Seed1
Au0.397
Energy-21.5
Binding len17
Me-6.433
Phylopstem0.3961902
Phylopflank0.26617136
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure