Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGGGGCTGCCGAGCTGCGAT
((((((((.((((.((..(((&)))...)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020195
GeneSymbolSDR39U1
Binding site144,166
Score0.846
Seed1
Au0.338
Energy-20.7
Binding len22
Me-5.851
Phylopstem0.21730493749999996
Phylopflank0.021840324999999973
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure