Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTGACTCAGCAATGCT
..(((((((.(((((((((((&)))))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020200
GeneSymbolPRTFDC1
Binding site939,960
Score0.892
Seed1
Au0.515
Energy-17.9
Binding len21
Me-6.2
Phylopstem0.48280403636363634
Phylopflank0.43941547875000014
Longest consecutive pairings15
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure