Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACAAAATGCAAATGCAAA
(((((..((((.((((.(((.&)))))))..))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020200
GeneSymbolPRTFDC1
Binding site1809,1830
Score0.846
Seed0
Au0.691
Energy-16.3
Binding len21
Me-10.729
Phylopstem3.4838556000000005
Phylopflank2.2067553827875006
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure