Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTAGAGGGCAGCAACGAT
(((..(((((..(((((((((&)))))))))...)))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020203
GeneSymbolMEPE
Binding site1055,1078
Score0.846
Seed0
Au0.544
Energy-15.6
Binding len23
Me-17.26
Phylopstem-0.3582565755555555
Phylopflank0.515974489125
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure