Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGATTCATATGAAATGTTACACATTGTTGCACAGGC
.(((((((.(((((((......&.)))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020204
GeneSymbolLHX9
Binding site4001,4039
Score1.0
Seed1
Au0.662
Energy-17.5
Binding len17
Me-4.85
Phylopstem1.3631302857142857
Phylopflank1.2057720587499998
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure