Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCTGA
...((((((((((........&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020204
GeneSymbolLHX9
Binding site1039,1050
Score1.0
Seed0
Au0.368
Energy-19.9
Binding len11
Me-8.34
Phylopstem2.9023715
Phylopflank4.4700682687499995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure