Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAATTGTATGTGTGAT
(((((..((((((((((((((&))))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020204
GeneSymbolLHX9
Binding site2076,2098
Score1.0
Seed0
Au0.765
Energy-19.5
Binding len22
Me-7.382
Phylopstem0.7475894142857145
Phylopflank0.5731418557499999
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure