Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCTCCAGCTGCAAG
(((((((((.((((((.....&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020210
GeneSymbolSEMA4B
Binding site1919,1936
Score0.974
Seed1
Au0.338
Energy-22.4
Binding len17
Me-5.18
Phylopstem0.9333984444444443
Phylopflank2.578599295
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure