Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGCGGGGCCAGGG
.((((((......(((((((((&)))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020211
GeneSymbolRGMA
Binding site10140,10158
Score0.846
Seed1
Au0.279
Energy-19.5
Binding len18
Me-15.867
Phylopstem5.5606655555555555
Phylopflank4.3806699625
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure