Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCCATACGAGACAGCCGTGGCCAAGTGCAAG
(((((((((((((((((((((&)))))..........)))))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020211
GeneSymbolRGMA
Binding site1338,1374
Score0.923
Seed1
Au0.412
Energy-23.5
Binding len36
Me-3.938
Phylopstem-0.18143803000000003
Phylopflank-0.3220373962499999
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure