Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCATCATTGGATCTCTTGCTGCCGGGGCCCTTCTCATCAGCTGCAT
.((((((((((((.((((((.&.)))))).)))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020219
GeneSymbolCEACAM19
Binding site930,980
Score0.923
Seed1
Au0.441
Energy-23.7
Binding len34
Me-4.65
Phylopstem0.14807368800000004
Phylopflank0.17560626499999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure