Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGCAGCCGCGGCTGCGGC
(((((((((((((((((.(((&)))..))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020226
GeneSymbolPRDM8
Binding site2992,3015
Score0.923
Seed1
Au0.191
Energy-33.5
Binding len23
Me-3.938
Phylopstem0.5333297411764706
Phylopflank3.00796532625
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure