Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGCGGGGCTTTAGCGATAGGTCA
.((((.((((((((((((((.&))))).))))))...)))...)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020227
GeneSymbolPRDM9
Binding site2781,2807
Score0.923
Seed0
Au0.412
Energy-24.2
Binding len26
Me-5.694
Phylopstem0.5669921666666666
Phylopflank0.683075325
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure