Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGAGAAGCTCTACGTCTGCAGGGA
...(((((((((((((((...&)))))).........).)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020227
GeneSymbolPRDM9
Binding site1829,1855
Score0.846
Seed0
Au0.426
Energy-23.4
Binding len26
Me-6.515
Phylopstem0.409478
Phylopflank-1.0499888000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure