Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGTTGTGTGTTAA
...(((((((((((((((....&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001365684
GeneSymbolNSD1
Binding site9528,9544
Score0.846
Seed0
Au0.632
Energy-17.1
Binding len16
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure