Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCAGCCTCAGCACATACAGCTGCAAG
(((((((((.((((((.((((&))))...))))))..........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020228
GeneSymbolPRDM10
Binding site3035,3068
Score0.846
Seed1
Au0.382
Energy-23.5
Binding len33
Me-5.18
Phylopstem4.428530966666667
Phylopflank2.516908255
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure