Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCTGCTGCTACAAAGTCTGCAAA
(((((((((((((.(((((((&))))))).))))).....)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020236
GeneSymbolMRPL1
Binding site143,171
Score0.846
Seed1
Au0.632
Energy-18.7
Binding len28
Me-4.794
Phylopstem1.401318647368421
Phylopflank0.7209165712500001
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure