Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGGCTGCAGAAGGAGCAGCTGCAGA
(((((((((((((((((.(((&))).))))))).........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020238
GeneSymbolINCENP
Binding site2378,2409
Score0.846
Seed1
Au0.412
Energy-26.3
Binding len31
Me-3.938
Phylopstem1.344417153846154
Phylopflank1.5682473865
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure