Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTGGCGGCCACGGAGCAGAGTCCCTCACCCCCACCAGCTGTAGC
(((((((((.((..((.(((.&.))).))..))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020239
GeneSymbolCDC42SE1
Binding site69,116
Score0.846
Seed1
Au0.368
Energy-17.8
Binding len23
Me-7.326
Phylopstem1.4755234444444445
Phylopflank1.5556510049999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure