Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTAGAGCA
.....(((..(((((((((((&)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020307
GeneSymbolCCNL1
Binding site804,821
Score1.0
Seed0
Au0.5
Energy-20.5
Binding len17
Me-15.964
Phylopstem4.712914454545453
Phylopflank3.81437769625
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure