Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGCAGCAGCGGCTGGCAGA
((((((((((.(((((..(((&)))..))))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020310
GeneSymbolMNT
Binding site1218,1241
Score0.846
Seed1
Au0.368
Energy-23.5
Binding len23
Me-6.762
Phylopstem-0.10691085454545454
Phylopflank-0.37323510000000004
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure