Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCTGCAGCTGCGAT
((((((((((((..((.....&))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020312
GeneSymbolCOQ9
Binding site74,91
Score0.923
Seed1
Au0.25
Energy-23.2
Binding len17
Me-6.084
Phylopstem1.3147490000000002
Phylopflank0.98044204225
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure