Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GGGTACCAGTTTAGGTTCCTAAGTAATAGTGA
((((((((((((((((((.(.&).)))))))...........))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_020315
GeneSymbolPDXP
Binding site1442,1474
Score0.872
Seed1
Au0.471
Energy-20.5
Binding len32
Me-3.938
Phylopstem-0.6404147034482758
Phylopflank-0.16288014
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure