Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAAAGCCGCAGGTGA
...((.((((((((.......&.)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020317
GeneSymbolRSRP1
Binding site193,210
Score0.923
Seed0
Au0.471
Energy-17.7
Binding len13
Me-9.384
Phylopstem0.7055884999999998
Phylopflank0.6432398674999998
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end1
Position5UTR
2D Structure