Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCTGTGGCA
.....((((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020320
GeneSymbolRARS2
Binding site1618,1635
Score1.0
Seed0
Au0.632
Energy-22.7
Binding len17
Me-13.666
Phylopstem2.928617115625
Phylopflank3.7078684749999997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure