Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTGCCTGCTGGGTGCCAGGTG
(((((((((.((..((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020328
GeneSymbolACVR1B
Binding site3500,3523
Score0.846
Seed1
Au0.471
Energy-20.7
Binding len18
Me-7.326
Phylopstem0.35485333333333335
Phylopflank0.012998026249999923
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure