Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAGCGGCAGCTCGGAGGCGGG
((((((((((.(((((((...&))))))).)))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020335
GeneSymbolVANGL2
Binding site1475,1499
Score0.846
Seed1
Au0.441
Energy-21.4
Binding len24
Me-6.762
Phylopstem3.2129638933333333
Phylopflank4.533463388750001
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure